Comparison of SSRs and SNPs in assessment of genetic relatedness in maize.

doi:10.1007/s10709-011-9606-9

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Article

Comparison of SSRs and SNPs in assessment of genetic relatedness in maize.

Genetica - 1 Aug 2011

Yang Xiaohong, Xu Yunbi, Shah Trushar, Li Huihui, Han Zhenhai, Li Jiansheng, Yan Jianbing

Abstract excerpt

Advances in high-throughput SNP genotyping and genome sequencing technologies have enabled genome-wide association mapping in dissecting the genetic basis of complex quantitative traits. In this study, 82 SSRs and 884 SNPs with minor allele frequencies (MAF) over 0.20 were used to compare their ability to assess population structure, principal component analysis (PCA) and relative kinship in a maize association...

Topics

Microsatellite Repeats
Phylogeny
Polymorphism, Single Nucleotide
Principal Component Analysis
Zea mays

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PMID: 21904888
DOI: 10.1007/s10709-011-9606-9

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