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Diversity and evolution of Ty1-copia retroelements in representative tribes of Bambusoideae subfamily.

Genetica - 1 Aug 2010

Zhou Ming-bing, Zhong Hao, Zhang Qin-hui, Tang Ke-Xuan, Tang Ding-Qin

Abstract excerpt

Ty1-copia retroelements have been found in all major plants and are largely responsible for the huge differences in the genome size. In this study we isolated and sequenced Ty1-copia reverse transcriptase (rt) gene fragments from 44 representative species of bamboo and nine cultivars or forms of Phyllostachys pubescens. Phylogenetic analysis of 72 distinct Ty1-copia rt sequences showed that Ty1-copia...

Topics

Amino Acid Sequence
DNA, Ribosomal Spacer
Evolution, Molecular
Genetic Variation
Molecular Sequence Data
Phylogeny
Polymorphism, Genetic
Retroelements
Sasa
Stochastic Processes
Transposases

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

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PMID: 20577895
DOI: 10.1007/s10709-010-9469-5

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