Phylogeographic structure and evolutionary history of Sindbis virus.

doi:10.1089/vbz.2009.0069

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Article

Phylogeographic structure and evolutionary history of Sindbis virus.

Vector borne and zoonotic diseases (Larchmont, N.Y.) - 1 Nov 2010

Lundström Jan O, Pfeffer Martin

Abstract excerpt

Sindbis (SIN) virus, Alphavirus, is a mosquito-borne and bird-associated virus with large geographic distribution in the Old World. We investigated the genetic diversity of 59 SIN strains after limited sequencing of their E2 glycoprotein genes. The SIN strains showed maximal diversity of 22.2% at the amino acid (aa) level, and formed five tentative genotypes. The SIN-I genotype included strains from Europe and...

Topics

Amino Acid Sequence
Genetic Variation
Molecular Sequence Data
Phylogeny
Sequence Alignment
Sindbis Virus
Viral Envelope Proteins

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PMID: 20420530
DOI: 10.1089/vbz.2009.0069

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