Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

ssSNPTarget: genome-wide splice-site Single Nucleotide Polymorphism database.

Human mutation - 1 Dec 2009

Yang Jin Ok, Kim Woo-Yeon, Bhak Jong

Abstract excerpt

Deep sequencing has shown that over 90% of human genes undergo alternative splicing. The splicing process requires exon-intron boundary recognition. SNPs located in the boundaries (splice sites) influence exon configuration. Also, splice site SNPs (ssSNPs) alter translation efficiency of the mRNA and lead to important changes in disease susceptibility. We developed the ssSNPTarget database to provide ssSNPs on...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Base Sequence
Share to Databases, Genetic
Share to Genome, Human

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to Internet

Share to Molecular Sequence Data

Share to Polymorphism, Single Nucleotide

Share to RNA Splice Sites

Source

Identifiers

PMID: 19760752
DOI: 10.1002/humu.21128

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 2 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

ssSNPTarget: genome-wide splice-site Single Nucleotide Polymorphism database.PMID 19760752Read ↗

FESD: a Functional Element SNPs Database in human.Semantic proximity Read ↗

Context-dependent robustness to 5' splice site polymorphisms in human populations.Semantic proximity Read ↗

dbNSFP v3.0: A One-Stop Database of Functional Predictions and Annotations for Human Nonsynonymous and Splice-Site SNVs.Semantic proximity Read ↗

Functional implications of splicing polymorphisms in the human genome.Semantic proximity Read ↗

dbNSFP v4: a comprehensive database of transcript-specific functional predictions and annotations for human nonsynonymous and splice-site SNVs.Semantic proximity Read ↗

SpliceVarDB: A comprehensive database of experimentally validated human splicing variants.Semantic proximity Read ↗

Genome-wide detection of human variants that disrupt intronic branchpointsSemantic proximity Read ↗

OpenSplice: the impact of half a million mutations on the alternative splicing of 600 human exonsSemantic proximity Read ↗

F-SNP: computationally predicted functional SNPs for disease association studies.Semantic proximity Read ↗

Genome-wide detection of human intronic AG-gain variants located between splicing branchpoints and canonical splice acceptor sites.Semantic proximity Read ↗

VarySysDB: a human genetic polymorphism database based on all H-InvDB transcripts.Semantic proximity Read ↗

Data-driven insights to inform splice-altering variant assessment.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.