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A seven-gene, multilocus, genus-wide approach to the phylogeny of mycobacteria using supertrees

1 Jun 2008

Abstract excerpt

This is the first study that estimates mycobacterial phylogeny using the maximum-likelihood method (PhyML-aLRT) on a seven-gene concatenate (hsp65, rpoB, 16S rRNA, smpB, sodA, tmRNA and tuf) and the super distance matrix (SDM) supertree method. Two sets of sequences were studied: a complete seven gene sequence set (set R, type strains of 87 species) and an incomplete set (set W, 132 species) with some missing...

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PMID: 18523191
DOI: 10.1099/ijs.0.65658-0

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